| AMIDE |
AMIDE is a competely free tool for viewing, analyzing, and registering volumetric medical imaging data sets. It’s been written on top of GTK+, and runs on any system that supports this toolkit (Linux, Windows, Mac OS X, etc.). |
http://amide.sourceforge.net |
| GSim |
GSim – free software tool for visualisation and processing of experimental and simulated nuclear magnetic resonance (NMR) spectrscopy. |
https://sourceforge.net/projects/gsim/ |
| ImageJ |
ImageJ is a free Java-based image processing program, which allows it to run on Linux, Mac OS X and Windows, in both 32-bit and 64-bit modes. |
https://imagej.nih.gov/ij/ |
| MedINRIA |
MedINRIA is a free collection of softwares, aimming at providing to clinicians state-of-the-art algorithms dedicated to medical image processing and visualization. MedINRIA is available for Microsoft windows XP/Vista, Linux Fedora Core, and MacOSX. |
http://www-sop.inria.fr/asclepios/software/MedINRIA/ |
| MIPAV |
MIPAV (Medical Image Processing, Analysis, and Visualization) application enables quantitative analysis and visualization of medical images of numerous modalities such as PET, MRI, CT, or microscopy. |
https://mipav.cit.nih.gov/ |
| Segment |
Segment is freely available for research purposes of cardiology applications. Segment includes a broad range of analysis tools for MRI, CT and Myocardial perfusion SPECT images. |
http://medviso.com/segment/ |
| RATS |
RATS is a rapid, robust and highly accurate algorithm for the skull-stripping of the rodent brain from MRI data. It consists of two stages, a mathematical morphology stage for initialization followed by a LOGISMOS-based approach for final segmentation. |
https://www.iibi.uiowa.edu/rats-rodent-brain-mri |
| Rodent Atlas |
Rat Brain and Mouse Brain Atlas |
http://labs.gaidi.ca/rat-brain-atlas/ |
| ITK-SNAP |
ITK-SNAP is a free software application used to segment structures in 3D medical images. |
http://www.itksnap.org/pmwiki/pmwiki.php |
| More MR software Resources |
- MRI & PET Image & Data Processing Resources
- Brain Processing Tools
- Perfusion Data Analysis
- DCE
- DSC
- ASL
- Diffusion Tensor Data Analysis
- Relaximetry
- Animal Image Processing Tools
- General Image Viewers
- Statistical Processing Software
- Cardiac Imaging
- Programming Software Platforms
- Brain Atlases
- Animal Atlases
|
https://www.radiology.pitt.edu/mrrc-software-resources.html |
